Buddy
November 15, 2019, 5:17am
1
When I try to use r-markdown, my output fails. This occurs for all output formats, and irrespective of file content. I cannot see a preview. Nothing in the viewer panel in r-studio. This is the error I get:
openFile: permission denied (Permission denied)
Error: pandoc document conversion failed with error 1
Execution halted
I tried uninstalling/re-installing r and r-studio. I also disabled my google-drive and drop-box, in case they were interfering somehow.
What else should I try?
Some discussions of this here
opened 05:04PM - 02 Feb 17 UTC
closed 04:14PM - 13 Oct 17 UTC
processing file: hw01_cg9.Rmd
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ordinary text without R code
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label: unnamed-chunk-1 (with options)
List of 2
$ message: logi FALSE
$ warning: logi FALSE
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ordinary text without R code
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label: unnamed-chunk-2
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label: unnamed-chunk-3
Parsed with column specification:
cols(
y = col_double(),
a = col_double(),
b = col_double(),
c = col_double(),
d = col_integer()
)
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ordinary text without R code
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ordinary text without R code
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ordinary text without R code
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inline R code fragments
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label: unnamed-chunk-7 (with options)
List of 2
$ message: logi TRUE
$ warning: logi TRUE
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label: unnamed-chunk-8
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inline R code fragments
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label: unnamed-chunk-9 (with options)
List of 2
$ message: logi TRUE
$ warning: logi TRUE
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ordinary text without R code
/Applications/RStudio.app/Contents/MacOS/pandoc/pandoc +RTS -K512m -RTS hw01_cg9.utf8.md --to html --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash --output hw01_cg9.html --smart --email-obfuscation none --self-contained --standalone --section-divs --template /Library/Frameworks/R.framework/Versions/3.3/Resources/library/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable 'theme:bootstrap' --include-in-header /var/folders/wq/ljbdffhn3mb7w5vlr054dh4m0000gn/T//RtmpaQGFXb/rmarkdown-str2d67475dfc5.html --mathjax --variable 'mathjax-url:https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML'
output file: hw01_cg9.knit.md
pandoc: hw01_cg9.html: openFile: permission denied (Permission denied)
Error: pandoc document conversion failed with error 1
Execution halted
Yesterday, I could knit the .rmd file normally. Today, I just add some notes on the file, but there is something wrong with it.
Anybody meets the same problem? How can I solve this problem?
For others, the issue has had to do with their network drive.
Some system Information could be useful as well
#### System Information:
- RStudio Edition: (Desktop or Server)
- RStudio Version:
- OS Version:
- R Version:
#### Also:
<!-- Depending on your issue, the following may be useful /-->
<!-- If a section isn't relevant or you can't collect it just delete that section below /-->
- RStudio diagnostics report: <!--see rstd.io/support-diagnostics-report /-->
- Your `sessionInfo()`:
- RStudio crash report: <!-- rstd.io/support-crash-report /-->
- RStudio application log files: <!-- rstd.io/support-ide-log-files /-->
system
December 6, 2019, 5:19am
3
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