Hi everyone,
After updating Rstudio, I tried to open a new R markdown file.
Rstudio asked me to install updated version of required packages, which sounds already weird after an update. Every time I try, there are several errors on the line of "package not available for rmarkdown".
I tried installing them in different ways, re-installing Rstudio, but nothing helped and I'm on a deadline. Any suggestion?
/usr/lib64/R/bin/config: line 189: make: command not found
/usr/lib64/R/bin/config: line 190: make: command not found
/usr/lib64/R/bin/config: line 191: make: command not found
/usr/lib64/R/bin/config: line 340: make: command not found
Error in system2(file.path(R.home("bin"), "R"), c("CMD", "config", x), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/stringi’
[23/26] Installing vctrs...
The downloaded source packages are in
‘/tmp/RtmpKquXRH/downloaded_packages’
Installing package into ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3’
(as ‘lib’ is unspecified)
also installing the dependencies ‘cli’, ‘glue’, ‘lifecycle’, ‘rlang’
trying URL 'https://cran.rstudio.com/src/contrib/cli_3.6.1.tar.gz'
Content type 'application/x-gzip' length 567293 bytes (553 KB)
==================================================
downloaded 553 KB
trying URL 'https://cran.rstudio.com/src/contrib/glue_1.6.2.tar.gz'
Content type 'application/x-gzip' length 106510 bytes (104 KB)
==================================================
downloaded 104 KB
trying URL 'https://cran.rstudio.com/src/contrib/lifecycle_1.0.3.tar.gz'
Content type 'application/x-gzip' length 106854 bytes (104 KB)
==================================================
downloaded 104 KB
trying URL 'https://cran.rstudio.com/src/contrib/rlang_1.1.1.tar.gz'
Content type 'application/x-gzip' length 762533 bytes (744 KB)
==================================================
downloaded 744 KB
trying URL 'https://cran.rstudio.com/src/contrib/vctrs_0.6.2.tar.gz'
Content type 'application/x-gzip' length 964633 bytes (942 KB)
==================================================
downloaded 942 KB
* installing *source* package ‘cli’ ...
** package ‘cli’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/cli’
* installing *source* package ‘glue’ ...
** package ‘glue’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/glue’
* installing *source* package ‘rlang’ ...
** package ‘rlang’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/rlang’
ERROR: dependencies ‘cli’, ‘glue’, ‘rlang’ are not available for package ‘lifecycle’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/lifecycle’
[24/26] Installing stringr...
ERROR: dependencies ‘cli’, ‘glue’, ‘lifecycle’, ‘rlang’ are not available for package ‘vctrs’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/vctrs’
The downloaded source packages are in
‘/tmp/RtmpKquXRH/downloaded_packages’
Installing package into ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3’
(as ‘lib’ is unspecified)
also installing the dependencies ‘cli’, ‘glue’, ‘lifecycle’, ‘magrittr’, ‘rlang’, ‘stringi’, ‘vctrs’
trying URL 'https://cran.rstudio.com/src/contrib/cli_3.6.1.tar.gz'
Content type 'application/x-gzip' length 567293 bytes (553 KB)
==================================================
downloaded 553 KB
trying URL 'https://cran.rstudio.com/src/contrib/glue_1.6.2.tar.gz'
Content type 'application/x-gzip' length 106510 bytes (104 KB)
==================================================
downloaded 104 KB
trying URL 'https://cran.rstudio.com/src/contrib/lifecycle_1.0.3.tar.gz'
Content type 'application/x-gzip' length 106854 bytes (104 KB)
==================================================
downloaded 104 KB
trying URL 'https://cran.rstudio.com/src/contrib/magrittr_2.0.3.tar.gz'
Content type 'application/x-gzip' length 267074 bytes (260 KB)
==================================================
downloaded 260 KB
trying URL 'https://cran.rstudio.com/src/contrib/rlang_1.1.1.tar.gz'
Content type 'application/x-gzip' length 762533 bytes (744 KB)
==================================================
downloaded 744 KB
trying URL 'https://cran.rstudio.com/src/contrib/stringi_1.7.12.tar.gz'
Content type 'application/x-gzip' length 7602365 bytes (7.3 MB)
==================================================
downloaded 7.3 MB
trying URL 'https://cran.rstudio.com/src/contrib/vctrs_0.6.2.tar.gz'
Content type 'application/x-gzip' length 964633 bytes (942 KB)
==================================================
downloaded 942 KB
trying URL 'https://cran.rstudio.com/src/contrib/stringr_1.5.0.tar.gz'
Content type 'application/x-gzip' length 175699 bytes (171 KB)
==================================================
downloaded 171 KB
* installing *source* package ‘cli’ ...
** package ‘cli’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/cli’
* installing *source* package ‘glue’ ...
** package ‘glue’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/glue’
* installing *source* package ‘magrittr’ ...
** package ‘magrittr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/magrittr’
* installing *source* package ‘rlang’ ...
** package ‘rlang’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/rlang’
* installing *source* package ‘stringi’ ...
** package ‘stringi’ successfully unpacked and MD5 sums checked
** using staged installation
/usr/lib64/R/bin/config: line 187: make: command not found
/usr/lib64/R/bin/config: line 188: make: command not found
/usr/lib64/R/bin/config: line 189: make: command not found
/usr/lib64/R/bin/config: line 190: make: command not found
/usr/lib64/R/bin/config: line 191: make: command not found
/usr/lib64/R/bin/config: line 340: make: command not found
Error in system2(file.path(R.home("bin"), "R"), c("CMD", "config", x), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/stringi’
ERROR: dependencies ‘cli’, ‘glue’, ‘rlang’ are not available for package ‘lifecycle’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/lifecycle’
ERROR: dependencies ‘cli’, ‘glue’, ‘lifecycle’, ‘rlang’ are not available for package ‘vctrs’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/vctrs’
[25/26] Installing tinytex...
ERROR: dependencies ‘cli’, ‘glue’, ‘lifecycle’, ‘magrittr’, ‘rlang’, ‘stringi’, ‘vctrs’ are not available for package ‘stringr’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/stringr’
The downloaded source packages are in
‘/tmp/RtmpKquXRH/downloaded_packages’
Installing package into ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3’
(as ‘lib’ is unspecified)
also installing the dependency ‘xfun’
trying URL 'https://cran.rstudio.com/src/contrib/xfun_0.39.tar.gz'
Content type 'application/x-gzip' length 135480 bytes (132 KB)
==================================================
downloaded 132 KB
trying URL 'https://cran.rstudio.com/src/contrib/tinytex_0.45.tar.gz'
Content type 'application/x-gzip' length 33082 bytes (32 KB)
==================================================
downloaded 32 KB
* installing *source* package ‘xfun’ ...
** package ‘xfun’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/xfun’
[26/26] Installing rmarkdown...
ERROR: dependency ‘xfun’ is not available for package ‘tinytex’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/tinytex’
The downloaded source packages are in
‘/tmp/RtmpKquXRH/downloaded_packages’
Installing package into ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3’
(as ‘lib’ is unspecified)
also installing the dependencies ‘fs’, ‘rappdirs’, ‘base64enc’, ‘cachem’, ‘memoise’, ‘mime’, ‘rlang’, ‘sass’, ‘digest’, ‘fastmap’, ‘ellipsis’, ‘highr’, ‘cli’, ‘glue’, ‘lifecycle’, ‘magrittr’, ‘stringi’, ‘vctrs’, ‘bslib’, ‘fontawesome’, ‘htmltools’, ‘jquerylib’, ‘jsonlite’, ‘knitr’, ‘stringr’, ‘tinytex’, ‘xfun’, ‘yaml’
trying URL 'https://cran.rstudio.com/src/contrib/fs_1.6.2.tar.gz'
Content type 'application/x-gzip' length 1185454 bytes (1.1 MB)
==================================================
downloaded 1.1 MB
trying URL 'https://cran.rstudio.com/src/contrib/rappdirs_0.3.3.tar.gz'
Content type 'application/x-gzip' length 12288 bytes (12 KB)
==================================================
downloaded 12 KB
trying URL 'https://cran.rstudio.com/src/contrib/base64enc_0.1-3.tar.gz'
Content type 'application/x-gzip' length 7833 bytes
==================================================
downloaded 7833 bytes
trying URL 'https://cran.rstudio.com/src/contrib/cachem_1.0.8.tar.gz'
Content type 'application/x-gzip' length 26510 bytes (25 KB)
==================================================
downloaded 25 KB
trying URL 'https://cran.rstudio.com/src/contrib/memoise_2.0.1.tar.gz'
Content type 'application/x-gzip' length 17852 bytes (17 KB)
==================================================
downloaded 17 KB
trying URL 'https://cran.rstudio.com/src/contrib/mime_0.12.tar.gz'
Content type 'application/x-gzip' length 12562 bytes (12 KB)
==================================================
downloaded 12 KB
trying URL 'https://cran.rstudio.com/src/contrib/rlang_1.1.1.tar.gz'
Content type 'application/x-gzip' length 762533 bytes (744 KB)
==================================================
downloaded 744 KB
trying URL 'https://cran.rstudio.com/src/contrib/sass_0.4.6.tar.gz'
Content type 'application/x-gzip' length 3024838 bytes (2.9 MB)
==================================================
downloaded 2.9 MB
trying URL 'https://cran.rstudio.com/src/contrib/digest_0.6.31.tar.gz'
Content type 'application/x-gzip' length 163502 bytes (159 KB)
==================================================
downloaded 159 KB
trying URL 'https://cran.rstudio.com/src/contrib/fastmap_1.1.1.tar.gz'
Content type 'application/x-gzip' length 46412 bytes (45 KB)
==================================================
downloaded 45 KB
trying URL 'https://cran.rstudio.com/src/contrib/ellipsis_0.3.2.tar.gz'
Content type 'application/x-gzip' length 8066 bytes
==================================================
downloaded 8066 bytes
trying URL 'https://cran.rstudio.com/src/contrib/highr_0.10.tar.gz'
Content type 'application/x-gzip' length 15084 bytes (14 KB)
==================================================
downloaded 14 KB
trying URL 'https://cran.rstudio.com/src/contrib/cli_3.6.1.tar.gz'
Content type 'application/x-gzip' length 567293 bytes (553 KB)
==================================================
downloaded 553 KB
trying URL 'https://cran.rstudio.com/src/contrib/glue_1.6.2.tar.gz'
Content type 'application/x-gzip' length 106510 bytes (104 KB)
==================================================
downloaded 104 KB
trying URL 'https://cran.rstudio.com/src/contrib/lifecycle_1.0.3.tar.gz'
Content type 'application/x-gzip' length 106854 bytes (104 KB)
==================================================
downloaded 104 KB
trying URL 'https://cran.rstudio.com/src/contrib/magrittr_2.0.3.tar.gz'
Content type 'application/x-gzip' length 267074 bytes (260 KB)
==================================================
downloaded 260 KB
trying URL 'https://cran.rstudio.com/src/contrib/stringi_1.7.12.tar.gz'
Content type 'application/x-gzip' length 7602365 bytes (7.3 MB)
==================================================
downloaded 7.3 MB
trying URL 'https://cran.rstudio.com/src/contrib/vctrs_0.6.2.tar.gz'
Content type 'application/x-gzip' length 964633 bytes (942 KB)
==================================================
downloaded 942 KB
trying URL 'https://cran.rstudio.com/src/contrib/bslib_0.5.0.tar.gz'
Content type 'application/x-gzip' length 4917051 bytes (4.7 MB)
==================================================
downloaded 4.7 MB
trying URL 'https://cran.rstudio.com/src/contrib/fontawesome_0.5.1.tar.gz'
Content type 'application/x-gzip' length 1276983 bytes (1.2 MB)
==================================================
downloaded 1.2 MB
trying URL 'https://cran.rstudio.com/src/contrib/htmltools_0.5.5.tar.gz'
Content type 'application/x-gzip' length 131880 bytes (128 KB)
==================================================
downloaded 128 KB
trying URL 'https://cran.rstudio.com/src/contrib/jquerylib_0.1.4.tar.gz'
Content type 'application/x-gzip' length 520207 bytes (508 KB)
==================================================
downloaded 508 KB
trying URL 'https://cran.rstudio.com/src/contrib/jsonlite_1.8.5.tar.gz'
Content type 'application/x-gzip' length 1053106 bytes (1.0 MB)
==================================================
downloaded 1.0 MB
trying URL 'https://cran.rstudio.com/src/contrib/knitr_1.43.tar.gz'
Content type 'application/x-gzip' length 895054 bytes (874 KB)
==================================================
downloaded 874 KB
trying URL 'https://cran.rstudio.com/src/contrib/stringr_1.5.0.tar.gz'
Content type 'application/x-gzip' length 175699 bytes (171 KB)
==================================================
downloaded 171 KB
trying URL 'https://cran.rstudio.com/src/contrib/tinytex_0.45.tar.gz'
Content type 'application/x-gzip' length 33082 bytes (32 KB)
==================================================
downloaded 32 KB
trying URL 'https://cran.rstudio.com/src/contrib/xfun_0.39.tar.gz'
Content type 'application/x-gzip' length 135480 bytes (132 KB)
==================================================
downloaded 132 KB
trying URL 'https://cran.rstudio.com/src/contrib/yaml_2.3.7.tar.gz'
Content type 'application/x-gzip' length 94330 bytes (92 KB)
==================================================
downloaded 92 KB
trying URL 'https://cran.rstudio.com/src/contrib/rmarkdown_2.22.tar.gz'
Content type 'application/x-gzip' length 2184560 bytes (2.1 MB)
==================================================
downloaded 2.1 MB
* installing *source* package ‘fs’ ...
** package ‘fs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/fs’
* installing *source* package ‘rappdirs’ ...
** package ‘rappdirs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/rappdirs’
* installing *source* package ‘base64enc’ ...
** package ‘base64enc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/base64enc’
* installing *source* package ‘mime’ ...
** package ‘mime’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/mime’
* installing *source* package ‘rlang’ ...
** package ‘rlang’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/rlang’
* installing *source* package ‘digest’ ...
** package ‘digest’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/digest’
* installing *source* package ‘fastmap’ ...
** package ‘fastmap’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/fastmap’
* installing *source* package ‘cli’ ...
** package ‘cli’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/cli’
* installing *source* package ‘glue’ ...
** package ‘glue’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/glue’
* installing *source* package ‘magrittr’ ...
** package ‘magrittr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/magrittr’
* installing *source* package ‘stringi’ ...
** package ‘stringi’ successfully unpacked and MD5 sums checked
** using staged installation
/usr/lib64/R/bin/config: line 187: make: command not found
/usr/lib64/R/bin/config: line 188: make: command not found
/usr/lib64/R/bin/config: line 189: make: command not found
/usr/lib64/R/bin/config: line 190: make: command not found
/usr/lib64/R/bin/config: line 191: make: command not found
/usr/lib64/R/bin/config: line 340: make: command not found
Error in system2(file.path(R.home("bin"), "R"), c("CMD", "config", x), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/stringi’
* installing *source* package ‘jsonlite’ ...
** package ‘jsonlite’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/jsonlite’
* installing *source* package ‘xfun’ ...
** package ‘xfun’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/xfun’
* installing *source* package ‘yaml’ ...
** package ‘yaml’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
sh: line 1: make: command not found
Error in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
error in running command
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/yaml’
ERROR: dependencies ‘rlang’, ‘fastmap’ are not available for package ‘cachem’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/cachem’
ERROR: dependency ‘rlang’ is not available for package ‘ellipsis’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/ellipsis’
ERROR: dependency ‘xfun’ is not available for package ‘highr’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/highr’
ERROR: dependencies ‘cli’, ‘glue’, ‘rlang’ are not available for package ‘lifecycle’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/lifecycle’
ERROR: dependency ‘xfun’ is not available for package ‘tinytex’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/tinytex’
ERROR: dependencies ‘rlang’, ‘cachem’ are not available for package ‘memoise’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/memoise’
ERROR: dependencies ‘cli’, ‘glue’, ‘lifecycle’, ‘rlang’ are not available for package ‘vctrs’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/vctrs’
ERROR: dependencies ‘digest’, ‘base64enc’, ‘rlang’, ‘fastmap’, ‘ellipsis’ are not available for package ‘htmltools’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/htmltools’
ERROR: dependencies ‘highr’, ‘xfun’, ‘yaml’ are not available for package ‘knitr’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/knitr’
ERROR: dependencies ‘fs’, ‘rlang’, ‘htmltools’, ‘rappdirs’ are not available for package ‘sass’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/sass’
ERROR: dependencies ‘rlang’, ‘htmltools’ are not available for package ‘fontawesome’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/fontawesome’
ERROR: dependency ‘htmltools’ is not available for package ‘jquerylib’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/jquerylib’
ERROR: dependencies ‘cli’, ‘glue’, ‘lifecycle’, ‘magrittr’, ‘rlang’, ‘stringi’, ‘vctrs’ are not available for package ‘stringr’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/stringr’
ERROR: dependencies ‘base64enc’, ‘cachem’, ‘htmltools’, ‘jquerylib’, ‘jsonlite’, ‘memoise’, ‘mime’, ‘rlang’, ‘sass’ are not available for package ‘bslib’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/bslib’
ERROR: dependencies ‘bslib’, ‘fontawesome’, ‘htmltools’, ‘jquerylib’, ‘jsonlite’, ‘knitr’, ‘stringr’, ‘tinytex’, ‘xfun’, ‘yaml’ are not available for package ‘rmarkdown’
* removing ‘/home/nico/R/x86_64-pc-linux-gnu-library/4.3/rmarkdown’
The downloaded source packages are in
‘/tmp/RtmpKquXRH/downloaded_packages’
✔ Packages successfully installed.