I'm trying to see if there are any other R packages that include reticulate
in the Imports and Suggests fields from the DESCRIPTION file. In the past, I've been using the GitHub search box to look for functions (for ex. system()
) that are used in R packages this way: org:cran system
. This would look for all instances of system()
used in CRAN packages.
What's the GitHub search phrase that I should use to look for instances of reticulate
in the Imports and Suggests fields from the DESCRIPTION file inside CRAN / non-CRAN (GitHub only) R packages?
Gabor
May 10, 2023, 10:06pm
2
I am not sure if you can search exactly for this, but I would go to Advanced search : and then write DESCRIPTION
in the "With this file name" field.
Btw. for CRAN packages, there are easier ways to query the packages that use reticulate:
pkgcache::meta_cache_revdeps("reticulate", recursive=FALSE)$package
Output
c("BRACoD.R", "BrailleR", "CytOpT", "DALEXtra", "DesignCTPB",
"DrDimont", "EEMDlstm", "EWSmethods", "FSDAM", "GeoMongo", "IGP",
"LDNN", "MBMethPred", "MFSIS", "ML2Pvae", "MaOEA", "PAMpal",
"PressPurt", "PsychWordVec", "RAthena", "RChest", "RGF", "RIA",
"RISCA", "RPyGeo", "RcausalEGM", "Robyn", "Rstg", "SPOTMisc",
"Seurat", "TSdeeplearning", "TheOpenAIR", "Trading", "XRPython",
"ag5Tools", "aif360", "altair", "animl", "anndata", "autokeras",
"azuremlsdk", "bbknnR", "botor", "caracas", "causalOT", "chess",
"chromConverter", "cleanNLP", "clinspacy", "criticality", "deepredeff",
"deepregression", "deeptrafo", "dgpsi", "digitalDLSorteR", "dimensionalAnalysis",
"dynamicSDM", "edgebundle", "eseis", "fastai", "feamiR", "featuretoolsR",
"forImage", "fuzzywuzzyR", "grafzahl", "greta", "h2o4gpu", "ip2location",
"ip2proxy", "janus", "kerasR", "keras", "kerastuneR", "kgen",
"leiden", "lilikoi", "mboxr", "meltt", "mglasso", "mhcnuggetsr",
"mnda", "modeltime.gluonts", "motifr", "mxnorm", "neptune", "ngboostForecast",
"nmslibR", "onnx", "otsad", "pharmr", "phateR", "processpredictR",
"pyMTurkR", "pysd2r", "rMIDAS", "rTLsDeep", "rTorch", "rdaisi",
"rdataretriever", "rescue", "reservoirnet", "reticulate", "rgee",
"rgeedim", "rgeomstats", "rgudhi", "rpyANTs", "rpymat", "sarp.snowprofile.pyface",
"scaffolder", "scapGNN", "sendigR", "sentiment.ai", "sgmcmc",
"shapper", "simulariatools", "sjSDM", "slendr", "smallsets",
"snap", "spacyr", "sqlparseR", "stepmixr", "sudachir", "survivalSL",
"tensorflow", "text", "tfaddons", "tfautograph", "tfdatasets",
"tfdeploy", "tfestimators", "tfhub", "tfio", "tfprobability",
"tfruns", "theft", "tidyrgee", "transforEmotion", "umap", "voice",
"youtubecaption", "mixKernel", "SpatialDDLS", "basilisk", "cbpManager",
"crisprScore", "CRISPRseek", "DeepPINCS", "DIAlignR", "GenProSeq",
"Herper", "HiContacts", "idr2d", "MACSr", "MOFA2", "msImpute",
"multicrispr", "netZooR", "phemd", "recountmethylation", "rGenomeTracks",
"scPipe", "seqArchR", "snifter", "spatialDE", "VDJdive", "zellkonverter",
"APL", "BiocHail", "BiocSklearn", "CelliD", "dasper", "densvis",
"FLAMES", "HiCool", "scviR", "SimBu", "singleCellTK", "velociraptor",
"BP4RNAseq")
2 Likes
Thanks for the reply @Gabor !
I guess I could have looked for the Reverse Dependencies section on CRAN - Package reticulate
As a complement, there's also R-universe power search , example .
1 Like
This looks like a really good alternative to searching for R packages on Github.
system
Closed
May 18, 2023, 4:45pm
6
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