Hi recurring problem of all panes suddenly freezing, not during running code but seemingly at random
Can still access top tabs (File, Edit etc) but nothing else, occurs maybe once a day (!!!)
Tried resetting desktop state yesterday but no change
Diagnostics report as follows:
[1] "1.2.5042"
$R
[1] "C:\\PROGRA~1\\R\\R-40~1.0\\bin\\x64\\R.exe"
$pdflatex
[1] ""
$bibtex
[1] ""
$gcc
[1] ""
$git
[1] ""
$svn
[1] ""
R version 4.0.0 (2020-04-24)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 18362)
Matrix products: default
locale:
[1] LC_COLLATE=English_United Kingdom.1252 LC_CTYPE=English_United Kingdom.1252 LC_MONETARY=English_United Kingdom.1252
[4] LC_NUMERIC=C LC_TIME=English_United Kingdom.1252
attached base packages:
[1] parallel stats4 stats graphics grDevices utils datasets methods base
other attached packages:
[1] ggpubr_0.4.0 GenomicRanges_1.40.0 GenomeInfoDb_1.24.2 IRanges_2.22.2 S4Vectors_0.26.1 BiocGenerics_0.34.0
[7] ggrepel_0.8.2 ggplot2_3.3.2 pheatmap_1.0.12 dplyr_1.0.0
loaded via a namespace (and not attached):
[1] tidyselect_1.1.0 purrr_0.3.4 haven_2.3.1 lattice_0.20-41 carData_3.0-4 colorspace_1.4-1
[7] vctrs_0.3.1 generics_0.0.2 rlang_0.4.6 pillar_1.4.4 foreign_0.8-79 glue_1.4.1
[13] withr_2.2.0 RColorBrewer_1.1-2 readxl_1.3.1 GenomeInfoDbData_1.2.3 lifecycle_0.2.0 zlibbioc_1.34.0
[19] munsell_0.5.0 ggsignif_0.6.0 gtable_0.3.0 cellranger_1.1.0 zip_2.0.4 labeling_0.3
[25] rio_0.5.16 forcats_0.5.0 curl_4.3 fansi_0.4.1 broom_0.5.6 Rcpp_1.0.4.6
[31] scales_1.1.1 backports_1.1.8 XVector_0.28.0 abind_1.4-5 farver_2.0.3 digest_0.6.25
[37] hms_0.5.3 stringi_1.4.6 openxlsx_4.1.5 rstatix_0.6.0 grid_4.0.0 cli_2.0.2
[43] tools_4.0.0 bitops_1.0-6 magrittr_1.5 RCurl_1.98-1.2 tibble_3.0.1 crayon_1.3.4
[49] tidyr_1.1.0 car_3.0-8 pkgconfig_2.0.3 ellipsis_0.3.1 data.table_1.12.8 assertthat_0.2.1
[55] rstudioapi_0.11 R6_2.4.1 nlme_3.1-147 compiler_4.0.0
SysInfo:
sysname release version nodename machine login user effective_user
"Windows" "10 x64" "build 18362" "GUSTAV" "x86-64" "Matt" "Matt" "Matt"
R Version:
_
platform x86_64-w64-mingw32
arch x86_64
os mingw32
system x86_64, mingw32
status
major 4
minor 0.0
year 2020
month 04
day 24
svn rev 78286
language R
version.string R version 4.0.0 (2020-04-24)
nickname Arbor Day
$ALLUSERSPROFILE
[1] "C:\\ProgramData"
$APPDATA
[1] "C:\\Users\\Matt\\AppData\\Roaming"
$asl.log
[1] "Destination=file"
$CLICOLOR_FORCE
[1] "1"
$CommonProgramFiles
[1] "C:\\Program Files\\Common Files"
$`CommonProgramFiles(x86)`
[1] "C:\\Program Files (x86)\\Common Files"
$CommonProgramW6432
[1] "C:\\Program Files\\Common Files"
$COMPUTERNAME
[1] "GUSTAV"
$ComSpec
[1] "C:\\WINDOWS\\system32\\cmd.exe"
$DISPLAY
[1] ":0"
$DriverData
[1] "C:\\Windows\\System32\\Drivers\\DriverData"
$GFORTRAN_STDERR_UNIT
[1] "-1"
$GFORTRAN_STDOUT_UNIT
[1] "-1"
$HOME
[1] "C:\\Users\\Matt\\Documents"
$HOMEDRIVE
[1] "C:"
$HOMEPATH
[1] "\\Users\\Matt"
$LOCALAPPDATA
[1] "C:\\Users\\Matt\\AppData\\Local"
$LOGONSERVER
[1] "\\\\GUSTAV"
$MINITAB_LICENSE_FILE
[1] "C:\\Program Files (x86)\\Minitab\\Minitab Express"
$MPLENGINE
[1] "tkAgg"
$MSYS2_ENV_CONV_EXCL
[1] "R_ARCH"
$NUMBER_OF_PROCESSORS
[1] "4"
$OneDrive
[1] "C:\\Users\\Matt\\OneDrive - University of Edinburgh"
$OneDriveCommercial
[1] "C:\\Users\\Matt\\OneDrive - University of Edinburgh"
$OS
[1] "Windows_NT"
$PATH
[1] "C:\\rtools40\\usr\\bin;C:\\Program Files\\R\\R-4.0.0\\bin\\x64;C:\\Rtools\\bin;C:\\Program Files (x86)\\Common Files\\Oracle\\Java\\javapath;C:\\ProgramData\\Oracle\\Java\\javapath;C:\\Program Files (x86)\\Intel\\iCLS Client\\;C:\\Program Files\\Intel\\iCLS Client\\;C:\\WINDOWS\\system32;C:\\WINDOWS;C:\\WINDOWS\\System32\\Wbem;C:\\WINDOWS\\System32\\WindowsPowerShell\\v1.0\\;C:\\Program Files (x86)\\Intel\\Intel(R) Management Engine Components\\DAL;C:\\Program Files\\Intel\\Intel(R) Management Engine Components\\DAL;C:\\Program Files (x86)\\Intel\\Intel(R) Management Engine Components\\IPT;C:\\Program Files\\Intel\\Intel(R) Management Engine Components\\IPT;C:\\Program Files\\Intel\\WiFi\\bin\\;C:\\Program Files\\Common Files\\Intel\\WirelessCommon\\;C:\\Program Files\\PuTTY\\;C:\\WINDOWS\\System32\\OpenSSH\\;C:\\Users\\Matt\\AppData\\Local\\Microsoft\\WindowsApps;C:\\Users\\Matt\\AppData\\Local\\GitHubDesktop\\bin;C:\\Users\\Matt\\AppData\\Local\\Microsoft\\WindowsApps;"
$PATHEXT
[1] ".COM;.EXE;.BAT;.CMD;.VBS;.VBE;.JS;.JSE;.WSF;.WSH;.MSC"
$PROCESSOR_ARCHITECTURE
[1] "AMD64"
$PROCESSOR_IDENTIFIER
[1] "Intel64 Family 6 Model 78 Stepping 3, GenuineIntel"
$PROCESSOR_LEVEL
[1] "6"
$PROCESSOR_REVISION
[1] "4e03"
$ProgramData
[1] "C:\\ProgramData"
$ProgramFiles
[1] "C:\\Program Files"
$`ProgramFiles(x86)`
[1] "C:\\Program Files (x86)"
$ProgramW6432
[1] "C:\\Program Files"
$PSModulePath
[1] "C:\\WINDOWS\\system32\\WindowsPowerShell\\v1.0\\Modules\\"
$PUBLIC
[1] "C:\\Users\\Public"
$QT_D3DCREATE_MULTITHREADED
[1] "1"
$R_ARCH
[1] "/x64"
$R_COMPILED_BY
[1] "gcc 8.3.0"
$R_DOC_DIR
[1] "C:/PROGRA~1/R/R-40~1.0/doc"
$R_HOME
[1] "C:/PROGRA~1/R/R-40~1.0"
$R_LIBS_USER
[1] "C:/Users/Matt/Documents/R/win-library/4.0"
$R_USER
[1] "C:/Users/Matt/Documents"
$RMARKDOWN_MATHJAX_PATH
[1] "C:/Program Files/RStudio/resources/mathjax-26"
$RS_LOCAL_PEER
[1] "\\\\.\\pipe\\21657-rsession"
$RS_RPOSTBACK_PATH
[1] "C:/Program Files/RStudio/bin/rpostback"
$RS_SHARED_SECRET
[1] "63341846741"
$RSTUDIO
[1] "1"
$RSTUDIO_CONSOLE_COLOR
[1] "256"
$RSTUDIO_CONSOLE_WIDTH
[1] "80"
$RSTUDIO_MSYS_SSH
[1] "C:/Program Files/RStudio/bin/msys-ssh-1000-18"
$RSTUDIO_PANDOC
[1] "C:/Program Files/RStudio/bin/pandoc"
$RSTUDIO_SESSION_PORT
[1] "21657"
$RSTUDIO_USER_IDENTITY
[1] "Matt"
$RSTUDIO_WINUTILS
[1] "C:/Program Files/RStudio/bin/winutils"
$RTOOLS40_HOME
[1] "C:\\rtools40"
$SESSIONNAME
[1] "Console"
$SystemDrive
[1] "C:"
$SystemRoot
[1] "C:\\WINDOWS"
$TEMP
[1] "C:\\Users\\Matt\\AppData\\Local\\Temp"
$TERM
[1] "xterm-256color"
$TMP
[1] "C:\\Users\\Matt\\AppData\\Local\\Temp"
$UOIPME_REG_PATH
[1] "C:\\Program Files\\Intel Corporation\\USB over IP"
$USERDOMAIN
[1] "GUSTAV"
$USERDOMAIN_ROAMINGPROFILE
[1] "GUSTAV"
$USERNAME
[1] "Matt"
$USERPROFILE
[1] "C:\\Users\\Matt"
$windir
[1] "C:\\WINDOWS"
[1] ".GlobalEnv" "package:ggpubr" "package:GenomicRanges" "package:GenomeInfoDb" "package:IRanges"
[6] "package:S4Vectors" "package:BiocGenerics" "package:parallel" "package:stats4" "package:ggrepel"
[11] "package:ggplot2" "package:pheatmap" "package:dplyr" "tools:rstudio" "package:stats"
[16] "package:graphics" "package:grDevices" "package:utils" "package:datasets" "package:methods"
[21] "Autoloads" "package:base"
Log file: rdesktop.log
--------------------------------------------------
(Empty)
Log file: rsession-Matt.log
--------------------------------------------------
07 Jul 2020 17:01:08 [rsession-Matt] ERROR system error 10053 (An established connection was aborted by the software in your host machine) [request-uri=/events/get_events]; OCCURRED AT: void __cdecl rstudio::session::HttpConnectionImpl<class rstudio_boost::asio::ip::tcp>::sendResponse(const class rstudio::core::http::Response &) c:\jenkins\workspace\ide\windows-v1.2\src\cpp\session\http\SessionHttpConnectionImpl.hpp:111; LOGGED FROM: void __cdecl rstudio::session::HttpConnectionImpl<class rstudio_boost::asio::ip::tcp>::sendResponse(const class rstudio::core::http::Response &) c:\jenkins\workspace\ide\windows-v1.2\src\cpp\session\http\SessionHttpConnectionImpl.hpp:116
07 Jul 2020 18:03:16 [rsession-Matt] ERROR system error 10053 (An established connection was aborted by the software in your host machine) [request-uri=/events/get_events]; OCCURRED AT: void __cdecl rstudio::session::HttpConnectionImpl<class rstudio_boost::asio::ip::tcp>::sendResponse(const class rstudio::core::http::Response &) c:\jenkins\workspace\ide\windows-v1.2\src\cpp\session\http\SessionHttpConnectionImpl.hpp:111; LOGGED FROM: void __cdecl rstudio::session::HttpConnectionImpl<class rstudio_boost::asio::ip::tcp>::sendResponse(const class rstudio::core::http::Response &) c:\jenkins\workspace\ide\windows-v1.2\src\cpp\session\http\SessionHttpConnectionImpl.hpp:116
08 Jul 2020 10:10:19 [rsession-Matt] ERROR system error 10053 (An established connection was aborted by the software in your host machine) [request-uri=/events/get_events]; OCCURRED AT: void __cdecl rstudio::session::HttpConnectionImpl<class rstudio_boost::asio::ip::tcp>::sendResponse(const class rstudio::core::http::Response &) c:\jenkins\workspace\ide\windows-v1.2\src\cpp\session\http\SessionHttpConnectionImpl.hpp:111; LOGGED FROM: void __cdecl rstudio::session::HttpConnectionImpl<class rstudio_boost::asio::ip::tcp>::sendResponse(const class rstudio::core::http::Response &) c:\jenkins\workspace\ide\windows-v1.2\src\cpp\session\http\SessionHttpConnectionImpl.hpp:116