rendering a html file

[Javad_Robatjazi]

I am trying to render a file containing multiple code chunks, but the studio does not give the rendered file. The codes are correct while functioning, but when it comes to rendering, it says the codes are wrong!!! Anyone has any idea, please?
Appreciated!

[nirgrahamuk]

@Javad_Robatjazi

it says the codes are wrong

we can't diagnose from such a vague statement.
What does it say ? you can copy and paste the error.
format it as code for readability.

FAQ: How to format your code

Formatting Code: the Basics All code or console output you include in your posts should be formatted properly. Luckily, this is very easy to do! Just use the code formatting button at the top of the post editing box: [image] Select some code Click the </> button! The code formatting button automatically adds special Markdown formatting symbols to whatever you selected. If you check the preview pane to the right of your post, you'll see that the forum software now outputs nicely formatted code . [04] The code formatting button is pretty smart! It can tell the difference between snippets of code that are part of a sentence and blocks of code that stand alone. …

Guessing
Common errors, when knitting arise from not making the knittable script self contained. knitting happens in its own environment so you need to add whatever data loading / data prep into your script as steps.

[Javad_Robatjazi]

sorry for the ambiguity.
this is the code: library(tidyr) # load the tidyr package
Q11 <- merged_data|>
pivot_wider(names_from = "variable",
values_from = "measure")|>
View()

plot(Q11$spermStored, Q11$shellVolume)

this is the error: processing file: biol_5140_assignment_1--Javad.Robatjazi--1.rmarkdown
|... | 6% (unnamed-chunk-3) Quitting from lines 74-81 (biol_5140_assignment_1--Javad.Robatjazi--1.rmarkdown)
Error in plot.window(...) : need finite 'xlim' values
Calls: .main ... eval -> plot -> plot.default -> localWindow -> plot.window

Execution halted

[nirgrahamuk]

you should not have |> View() in a script that you will try to Knit.
Remove it and try again.

[Javad_Robatjazi]

I removed it, but it did not work!

[nirgrahamuk]

Same or different error ?

[Javad_Robatjazi]

different error. Actually, when it comes to codes in chunks, it brings errors. like the code for check_model for example.

[nirgrahamuk]

would you like to say what the error is ?

check_model means nothing to me ... should it ?