Providing estimates and estimating difference btwn those probabilities

This contingency table:

I must provide estimates for the probability of severe acne at six weeks for each treatment and an estimate for the difference of those probabilities. Then I must report a 99% confidence interval.

Should I run a linear regression model, get the slope and intercept and then plug in the values?
I'm a little stuck at where to begin.

Hi, and welcome!

Please see the FAQ: What's a reproducible example (`reprex`) and how do I do one? Using a reprex, complete with representative data will attract quicker and more answers. Also, see the homework policy.

I suggest installing the caret package and studying the help page for the confusionMatrix function for examples of what's possible for data in this form.