I am not sure what code to use in order to get my plots to print in the RMarkdown html output.
Also, I am not sure if running the command scripts in the console window is creating a problem which executes fine there and then also putting the same command script into the source window as a code chunk right before using knitr
A handy way to supply some sample data is the dput() function. In the case of a large dataset something like dput(head(mydata, 100)) should supply the data we need. Just do dput(mydata) where mydata is your data. Copy the output and paste it here between
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