Hi everyone
I have been experiencing an annoying issue while running one of our in house functions - soon to be open source, called DWReml. It fits the linear mixed model using the same or very similar syntax to ASReml-R. My laptop freezes and or the R session gets stuck. Here is a slice of the session when it occurs
I am using 2023.06.0 Build 421, but promise to upgrade later today! Apologies for this slackness but Ubuntu Jammy Jellyfish was set up by me and I am a newbee to being an IT installer
many thanks
brian
temp <- update(rr1rr1.dwr) # says converged so up the ante 65702.94
dwreml Thu Feb 29 20:27:53 2024
Iter loglik sigma2 nedf
1 91305.99 1.0 85940 20:30:19
2 91306.20 1.0 85940 20:32:35
3 91306.69 1.0 85940 20:34:51
4 91307.64 1.0 85940 20:37:08
5 91309.22 1.0 85940 20:39:22
6 91311.55 1.0 85940 20:41:38
7 91314.58 1.0 85940 20:43:55
8 91318.09 1.0 85940 20:46:12 1 boundary exceptions
9 91321.77 1.0 85940 20:48:29 1 boundary exceptions
10 91325.30 1.0 85940 20:50:46 1 bounded parameters
11 91328.44 1.0 85940 20:53:02
12 91331.07 1.0 85940 20:55:19
13 91333.17 1.0 85940 20:57:35
Reached iteration 13
Parameter convergence 0 Likelihood convergence 0
Finished Thu Feb 29 20:57:35 2024
[1301214:1301215:20240229,205738.465008:ERROR file_io_posix.cc:148] open /home/brian/.r/crashpad_database/pending/5d30b9a5-82a7-4a56-aa16-0169647bd515.lock: File exists (17)
[1301214:1301215:20240229,205738.465043:ERROR file_io_posix.cc:148] open /home/brian/.r/crashpad_database/pending/26894d85-6dfa-4469-8daa-d48a2628f2fd.lock: File exists (17)
[1301214:1301215:20240229,205738.465051:ERROR file_io_posix.cc:148] open /home/brian/.r/crashpad_database/pending/d1930fb6-cd62-4178-b7a9-3afa5aff2ef0.lock: File exists (17)
[1301214:1301214:20240229,205738.467453:ERROR process_memory_range.cc:86] read out of range
[1301214:1301214:20240229,205738.467456:ERROR elf_image_reader.cc:558] missing nul-terminator
[1301214:1301214:20240229,205738.467484:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468486:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468506:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468526:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468546:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468564:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468584:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468733:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468752:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468932:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468950:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468970:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.468990:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469006:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469024:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469043:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469060:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469080:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469098:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469116:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469133:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469151:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469170:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469322:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469340:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469359:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469395:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.469444:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.470148:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301214:20240229,205738.470165:ERROR elf_dynamic_array_reader.h:61] tag not found
[1301214:1301215:20240229,205738.472084:ERROR directory_reader_posix.cc:42] opendir: No such file or directory (2)