Issues updating TraMineR

General
1

I am trying to install TraMineR and am receiving the following error message:
Any help would be greatly appreciated.

Installing package into ‘/usr/lib64/R/library’
(as ‘lib’ is unspecified)
trying URL 'https://cran.wustl.edu/src/contrib/TraMineR_2.2-8.tar.gz'
Content type 'application/x-gzip' length 1254947 bytes (1.2 MB)

downloaded 1.2 MB

  • installing source package ‘TraMineR’ ...
    ** package ‘TraMineR’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    using C compiler: ‘gcc (GCC) 8.5.0 20210514 (Red Hat 8.5.0-20)’
    using C++ compiler: ‘g++ (GCC) 8.5.0 20210514 (Red Hat 8.5.0-20)’
    g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-s witches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c DHDdistance.cpp -o DHDdistan ce.o
    g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-s witches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c LCPdistance.cpp -o LCPdistan ce.o
    g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-s witches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c NMSDURSoftdistance.cpp -o NM SDURSoftdistance.o
    g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-s witches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c NMSMSTSoftdistance.cpp -o NM SMSTSoftdistance.o
    g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-s witches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c NMSMSTSoftdistanceII.cpp -o NMSMSTSoftdistanceII.o
    g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-s witches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c NMSMSTdistance.cpp -o NMSMST distance.o
    g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-s witches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c NMSdistance.cpp -o NMSdistan ce.o
    In file included from TraMineR.h:21,
    from distancecalculator.h:3,
    from NMSdistance.h:3,
    from NMSdistance.cpp:1:
    /usr/include/R/Rmath.h:210:15: error: ‘std::Rf_beta’ has not been declared
    #define beta Rf_beta
    ^~~~~~~
    make: *** [/usr/lib64/R/etc/Makeconf:200: NMSdistance.o] Error 1
    ERROR: compilation failed for package ‘TraMineR’
  • removing ‘/usr/lib64/R/library/TraMineR’
  • restoring previous ‘/usr/lib64/R/library/TraMineR’

The downloaded source packages are in
‘/tmp/Rtmp6x4yPN/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
Warning message:
In install.packages("TraMineR") :
installation of package ‘TraMineR’ had non-zero exit status

2

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