Issue with pkgdown site

Hi,

I have tried to publish a pkgdown site for the first time (Create Pharmacometric Models • pmxcode). It works for the most part but I am experiencing a few "styling" issue, namely:

  • the bootstrap theme on github is different from the apparent style of the site when it is built locally.
  • the extra css file seems missing .
  • the hex-logo is also missing.
  • the order of the articles is incorrect.

It almost looks like my _pkgdown.yml is ignored...

Any help will be greatly appreciated.

url: https://sbihorel.github.io/pmxcode/
template:
  bootstrap: 5
  includes:
    in_header: pkgdown/extra.css
articles:
- title: Articles
  navbar: ~
  contents:
  - library
  - covariates

Screen shot of the github site:

Screen shot of the site as built locally: