Hello everyone,
Priority, I am not accustomed to English.
---
title:
author: "Name Surname"
date: "`r Sys.Date()`"
output: rmarkdown::html_vignette
vignette: >
%\VignetteEngine{knitr::knitr}
%\VignetteIndexEntry{Title of your vignette}
%\usepackage[UTF-8]{inputenc}
---
```{r setup, include = FALSE}
library(knitr)
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>"
)
BiocStyle::markdown()
```
I created a markdown in R.
If you knit the created file, the output file should be created in the folder of the created file. However, my situation is created in a file that I do not specify now. What should I do?
I'm not familiar with BiocStyle::markdown()
function, but for regular rmarkdown you can specify output_file
as a parameter to the function. So, something like this:
rmarkdown::render(output_file = "your_file.html")
In your case you should see the help for the function with, for example, ?BiocStyle::markdown()
in R console.
1 Like
thank you for reply!
but i can't solve this problem...ㅠㅠ
" Error in regexpr("\.([[:alnum:]]+)$", x) : argument "input" is missing, with no default Calls: ... -> %in% -> match -> tolower -> -> regexpr Execution halted"
input means, the .Rmd file just created?
Have a look at the documentation for rmarkdown::render (you can type ?rmarkdown::render
into your console to open it up)
It says you need an input arguement, the "Input file (R script, Rmd, or plain markdown)."
https://www.rdocumentation.org/packages/rmarkdown/versions/1.8/topics/render
1 Like