I am trying to convert my html output to pdf output in rmarkdown using the rticles package. I changed a lot of things in the .Rmd file and everything worked except this one thing on which I am stuck. I have a table in the Rmarkdown file which has a caption that has a link to a website as a footnote. That chunk is not working and I am getting an error. I have already tried getting the text reference in the caption but that also didn't work for me (I guess because I'm not using bookdown) Here is the code chunk:
X1=inflation_data$exp[!is.na(inflation_data$exp)&inflation_data$date<="2018-11-02"]-100
X2=inflation_data$exp[!is.na(inflation_data$exp)&inflation_data$date>="2019-01-01"]-100
Y1=inflation_data$inf_yy[inflation_data$date<="2018-11-02"]
Y2=inflation_data$inf_yy[inflation_data$date>="2019-01-01"]
df1<-DTW(X1,Y1)%>%setNames(c('x','Fixed ER regime'))
df2<-DTW(X2,Y2)%>%setNames(c('x','Managed ER regime'))
list_df=list(df1,df2)
df1122 <- list_df %>% reduce(inner_join, by='x')
colnames(df1122)[1]=''
knitr::kable(df1122,digits = 2, caption = 'Pan has been folRate regfixed) togram. Ogram was making ER flnto the IMF program.^[https://www.imf.org/05/12/pr19157-IF-Rhes-Sff-Lel-Ant-on-Emic-Poies-wh-Wn-for-a-Thee-Ye-EF]')%>%kable_classic("striped",font_size=10)%>%row_spec(0,bold=T)
And I am getting the following error:
! Missing inserted. <inserted text> l.621 ...cies-with-Pakistan-for a-Three-Year-EFF]}
Try to find the following text in elsevier.Rmd:
...cies-with-Pakistan-for a-Three-Year-EFF]}You may need to add around a certain inline R expression
rin
elsevier.Rmd (see the above hint). See
Inline R expression don't work when using scientific notation (pdf_document) · Issue #385 · rstudio/rmarkdown · GitHub for more info. Error:
LaTeX failed to compile elsevier.tex. See
The R package tinytex - Helper Functions to Manage TinyTeX, and Compile LaTeX Documents - Yihui Xie | 谢益辉 for debugging tips. See
elsevier.log for more info. Execution halted
If I remove ^[https://www.imf.org/05/12/pr19157-IF-Rhes-Sff-Lel-Ant-on-Emic-Poies-wh-Wn-for-a-Thee-Ye-EF] from my code it works fine without any error.
Also, the YAML part:
---
title: "My title"
author:
- name: My name
email: my.name@google.com
affiliation: My Department, My Company
correspondingauthor: true
footnote: 1
address:
- code: My department
organization: My organization
addressline: 1 my adress
city: My city
state: My state
postcode: 14000
country: My country
footnote:
- code: 1
text: "This is the first author footnote."
abstract: |
This is my long abstract. This is my long abstract. This is my long abstract. This is my long abstract. This is my long abstract. This is my long abstract. This is my long abstract. This is my long abstract. This is my long abstract. This is my long abstract. This is my long abstract.
keywords:
- keyword1
- keyword2
- keyword3
journal: "An awesome journal"
date: "`r Sys.Date()`"
classoption: preprint, 3p, authoryear
bibliography: references.bib
linenumbers: false
numbersections: true
# Use a CSL with `citatssssssssssssssssssssssion_package = "default"`
# csl: https://www.zotero.org/styles/elsevier-harvard
output:
rticles::elsevier_article:
latex_engine: xelatex
keep_tex: true
citation_package: natbib
fontsize: 12pt
---