git hub actions issue

wdonald1985 · June 8, 2021, 1:14pm

I am attempting to use git hub actions with my R package https://github.com/donaldRwilliams/blsmeta

I am getting the following error

It seems particular to JAGS.

What can I do to ensure JAGS is installed and loaded correctly on macOS-latest . My thought was to change the .yaml but wanted to get some advice before doing so (just now going to github-actions from travis, so not familiar with it).

thanks in advance

wdonald1985 · June 8, 2021, 1:20pm

This seems to be relevant.

gist.github.com

https://gist.github.com/casallas/8411082

rjags_mac.md

# To install

1. Install jags: in the terminal using [homebrew](http://brew.sh/) `brew install jags`
2. Install rjags: in R
```
install.packages("rjags")
library(rjags)
```

# Potential issues

This file has been truncated. show original

jimhester · June 16, 2021, 12:39pm

Yes, if your package is dependant on the jags system dependency you will need to install it in your workflow.

Add something like the following to your steps in .github/workflows/R-CMD-check.yaml

- name: Install system dependencies
  run: brew install jags

system · July 23, 2021, 1:14pm

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