Our bioinformatician gave me one vcf file (exp1_FPOA_96.vcf) from Illumina HiSeq 3000 with 150 bp paired-end reads and a target insert size of 500 bp (GBS-restriction enzyme) to proceed with further data analyses. I am visiting the following website.
I have installed the following packages in R-studio .

  1. library(vcfR)
  2. library(poppr)
  3. library(ape)
  4. library(RColorBrewer)
I cant sense I will proceed with this command...


rubi.VCF <- read.vcfR("prubi_gbs.vcf.gz")

please help me how my vcf file will be directed to R.

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