Hi, guys, I am building a shiny application with Bioconductor packages. I already specified the Bioconductor repo, the app runs well locally, and I am using packrat for this project. While publishing on shiny.io, I still got an error of updating "GenomicFeatures", but Packrat showed me I already installed the latest Windows binary version 1.32.2 of GenomicFeatures. Any idea what might be wrong?
error: Building package: GenomicFeatures
Unhandled Exception: Child Task 561487436 failed: Error building image: Error fetching GenomicFeatures (1.32.2) source. Error downloading package source. Please update your BioConductor packages to the latest version and try again
sessionInfo()
R version 3.5.0 (2018-04-23)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows >= 8 x64 (build 9200)
Matrix products: default
locale:
[1] LC_COLLATE=Chinese (Simplified)_China.936 LC_CTYPE=Chinese
(Simplified)_China.936
[3] LC_MONETARY=Chinese (Simplified)_China.936 LC_NUMERIC=C
[5] LC_TIME=Chinese (Simplified)_China.936
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] compiler_3.5.0 BiocInstaller_1.30.0 tools_3.5.0
packrat_0.4.9-3
getOption("repos")
BioCsoft
BioCann
"https://bioconductor.org/packages/3.7/bioc"
"https://bioconductor.org/packages/3.7/data/annotation"
BioCexp
BioCworkflows
"https://bioconductor.org/packages/3.7/data/experiment"
"https://bioconductor.org/packages/3.7/workflows"
CRAN
"https://cran.rstudio.com/"