HI Rcommunity,
Im try to make a cluster. First Im put the scale data but when I need verify the specific number of cluster appear this error text. Im not sure if is memory error. Im try to other PC but the error was the same ![]()
The file size is 28.300 KB
Error: no se puede ubicar un vector de tamaño 44.4 Gb
Any advice for use ff and bigmemory packages for make a solution. Im read about this but I dont have any idea for this.
code
library(readxl)
library(tidyverse)
library(factoextra)
datos <- scale(P_df1)
fviz_nbclust(x = datos, FUNcluster = kmeans, method = "wss", k.max = 15,
diss = get_dist(datos, method = "euclidean"), nstart = 50)
The error showed when Im run fviz_nbclust
P_df1<- structure(list(AÑO = c(2017, 2017, 2017, 2017, 2017, 2017, 2017,
2017, 2017, 2017, 2017, 2017, 2017, 2017, 2017, 2017, 2017, 2017,
2017, 2017, 2018, 2018, 2018, 2018, 2018, 2018, 2018, 2018, 2018,
2018, 2018, 2018, 2018, 2018, 2018, 2018, 2018, 2018, 2018, 2018,
2018, 2019, 2019, 2019, 2019, 2019, 2019, 2019, 2019, 2019, 2019,
2019, 2019, 2019, 2019, 2019, 2019, 2019, 2019, 2019, 2019, 2019
), PERIODO = c(1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2,
2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2,
2, 2, 2, 2), PUNT_LECTURA_CRITICA = c(78, 67, 56, 64, 69, 57,
69, 66, 65, 74, 65, 67, 71, 65, 63, 49, 63, 63, 71, 73, 67, 59,
64, 60, 70, 60, 49, 50, 62, 46, 62, 58, 53, 54, 39, 52, 67, 52,
41, 49, 55, 51, 58, 63, 56, 64, 52, 54, 39, 41, 48, 59, 45, 55,
39, 63, 56, 60, 51, 68, 41, 55), PERCENTIL_LECTURA_CRITICA = c(98,
78, 44, 69, 83, 47, 84, 77, 72, 95, 73, 78, 90, 74, 67, 25, 66,
65, 89, 92, 92, 72, 85, 77, 96, 74, 38, 41, 81, 27, 81, 70, 52,
57, 10, 50, 93, 49, 14, 38, 59, 44, 70, 84, 64, 85, 48, 54, 12,
17, 36, 72, 27, 60, 13, 84, 65, 75, 47, 93, 16, 60), PUNT_GLOBAL = c(432,
328, 297, 308, 331, 294, 354, 337, 314, 363, 337, 332, 333, 352,
330, 275, 329, 315, 375, 357, 312, 281, 342, 312, 338, 267, 237,
235, 288, 183, 273, 250, 249, 249, 176, 255, 343, 245, 175, 200,
284, 213, 290, 275, 243, 256, 230, 225, 177, 180, 214, 315, 185,
272, 178, 339, 265, 247, 253, 338, 165, 250), PERCENTIL_GLOBAL = c(100,
72, 56, 61, 73, 54, 85, 77, 64, 89, 77, 74, 74, 84, 73, 44, 72,
65, 94, 86, 87, 72, 96, 88, 95, 63, 42, 41, 76, 8, 67, 52, 51,
51, 5, 56, 96, 48, 5, 17, 74, 28, 79, 71, 50, 59, 41, 37, 9,
10, 29, 90, 12, 69, 9, 96, 65, 53, 57, 96, 4, 54), ESTU_INSE_INDIVIDUAL = c(4,
3, 3, 3, 3, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 2, 3, 3, 3, 3, 3, 2,
3, 3, 3, 2, 2, 2, 2, 1, 2, 2, 2, 2, 1, 2, 3, 2, 1, 1, 2, 2, 2,
2, 2, 2, 2, 2, 1, 1, 2, 3, 1, 2, 1, 3, 2, 2, 2, 3, 1, 2), EDAD = c(18.5516769336071,
16.455969581749, 18.466803559206, 18.2012320328542, 17.8309798270893,
15.4393622161379, 18.4887063655031, 17.8556195965418, 16.1567080045096,
17.8556195965418, 16.1676598486069, 17.3682997118156, 16.8419771863118,
17.7324207492795, 17.1958213256484, 18.0828530259366, 17.9541786743516,
17.6667146974063, 17.7899135446686, 16.7023574144487, 18.178674351585,
16.477049444355, 16.5701401191818, 16.6556130209918, 17.2114390021296,
17.3373897170672, 16.7678734408275, 16.8062062671129, 17.1840584119258,
19.806258148631, 16.814420444174, 19.1129363449692, 17.4989351992699,
16.7760876178887, 16.885609978704, 16.4797874053793, 18.1184438040346,
16.5783540022548, 16.814420444174, 17.5701247337998, 17.0663218740493,
18.0005764519383, 17.1648919987831, 17.014298752662, 15.8911257851506,
16.9184666869486, 16.9376331000913, 15.9513609276856, 18.6338124572211,
18.2387952154489, 16.9759659263766, 16.5537123530359, 18.1922467214296,
17.5208396714329, 17.5728627928202, 17.9047413171927, 17.3483419531488,
20.0307692307692, 18.40308401787, 16.2908680947012, 17.1402494675996,
17.5454822026164)), row.names = c(NA, -62L), class = c("tbl_df",
"tbl", "data.frame"))
sessionInfo()
R version 4.0.5 (2021-03-31)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19043)
Matrix products: default
locale:
[1] LC_COLLATE=Spanish_Colombia.1252
[2] LC_CTYPE=Spanish_Colombia.1252
[3] LC_MONETARY=Spanish_Colombia.1252
[4] LC_NUMERIC=C
[5] LC_TIME=Spanish_Colombia.1252
attached base packages:
[1] stats graphics grDevices utils datasets
[6] methods base
other attached packages:
[1] factoextra_1.0.7 forcats_0.5.1 stringr_1.4.0
[4] dplyr_1.0.5 purrr_0.3.4 readr_1.4.0
[7] tidyr_1.1.3 tibble_3.1.1 ggplot2_3.3.5
[10] tidyverse_1.3.1 readxl_1.3.1
loaded via a namespace (and not attached):
[1] ggrepel_0.9.1 Rcpp_1.0.7
[3] lubridate_1.7.10 prettyunits_1.1.1
[5] ps_1.6.0 assertthat_0.2.1
[7] digest_0.6.27 utf8_1.2.1
[9] V8_3.4.2 R6_2.5.0
[11] cellranger_1.1.0 backports_1.2.1
[13] reprex_2.0.0 stats4_4.0.5
[15] evaluate_0.14 httr_1.4.2
[17] pillar_1.6.3 rlang_0.4.10
[19] curl_4.3.1 rstudioapi_0.13
[21] callr_3.7.0 rmarkdown_2.8
[23] loo_2.4.1 munsell_0.5.0
[25] broom_0.7.6 compiler_4.0.5
[27] modelr_0.1.8 xfun_0.23
[29] rstan_2.21.2 pkgconfig_2.0.3
[31] pkgbuild_1.2.0 htmltools_0.5.1.1
[33] tidyselect_1.1.1 gridExtra_2.3
[35] codetools_0.2-18 matrixStats_0.58.0
[37] fansi_0.4.2 crayon_1.4.1
[39] dbplyr_2.1.1 withr_2.4.3
[41] grid_4.0.5 jsonlite_1.7.2
[43] gtable_0.3.0 lifecycle_1.0.0
[45] DBI_1.1.1 magrittr_2.0.1
[47] StanHeaders_2.21.0-7 scales_1.1.1
[49] RcppParallel_5.1.4 cli_3.0.1
[51] stringi_1.6.1 fs_1.5.0
[53] xml2_1.3.2 ellipsis_0.3.2
[55] generics_0.1.0 vctrs_0.3.8
[57] tools_4.0.5 glue_1.4.1
[59] hms_1.0.0 parallel_4.0.5
[61] processx_3.5.2 yaml_2.2.1
[63] inline_0.3.19 colorspace_2.0-1
[65] rvest_1.0.0 knitr_1.33
[67] haven_2.4.1
> memory.limit()
[1] 3545
Thanks!