Hi Posit Community,
devtools seems to be in an infinite loop on a renv enabled project.
Whenever I attempt to load the package with load_all, I get the message:
ℹ Loading RiverViz
ℹ The packages "dplyr", "echarts4r" (>= 0.4.5), and "tidyr" (>= 1.3.0) are required.
✖ Would you like to install them?
1: Yes
2: No
However, both those packages, with the versions suggested, are installed. Here's renv::diagnostics to confirm those packages and their versions
Diagnostics Report [renv 1.0.3]
===============================
# Session Info ----------------------------------------------------------
R version 4.3.0 (2023-04-21)
Platform: aarch64-apple-darwin20 (64-bit)
Running under: macOS 14.1.2
Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.11.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: America/New_York
tzcode source: internal
attached base packages:
[1] stats graphics grDevices datasets utils methods base
loaded via a namespace (and not attached):
[1] tippy_1.0.0 UU_1.43.0 BOR_0.4.0
[4] shinyjs_2.1.0 htmlwidgets_1.6.4 devtools_2.4.5
[7] remotes_2.4.2.1 gargle_1.5.2 vctrs_0.6.3
[10] tools_4.3.0 generics_0.1.3 curl_5.2.0
[13] shinyVirga_0.37.0 tibble_3.2.1 fansi_1.0.4
[16] pkgconfig_2.0.3 desc_1.4.3 assertthat_0.2.1
[19] lifecycle_1.0.3 cicerone_1.0.5.9000 compiler_4.3.0
[22] stringr_1.5.0 brio_1.1.4 virgaUtils_0.5.0
[25] munsell_0.5.0 snakecase_0.11.1 golem_0.4.1
[28] httpuv_1.6.13 htmltools_0.5.7 echartsUtils_0.7.1
[31] usethis_2.2.2 sass_0.4.8 yaml_2.3.8
[34] RiverViz_0.1.0 later_1.3.2 pillar_1.9.0
[37] urlchecker_1.0.1 ellipsis_0.3.2 googlesheets4_1.1.1
[40] cachem_1.0.8 sessioninfo_1.2.2 mime_0.12
[43] digest_0.6.33 stringi_1.7.12 purrr_1.0.2
[46] rprojroot_2.0.4 fastmap_1.1.1 bs4Dash_2.2.1
[49] colorspace_2.1-0 cli_3.6.1 magrittr_2.0.3
[52] pkgbuild_1.4.3 utf8_1.2.3 crssDB_1.0.0
[55] withr_2.5.2 scales_1.3.0 promises_1.2.1
[58] lubridate_1.9.3 googledrive_2.1.1 timechange_0.2.0
[61] config_0.3.2 cellranger_1.1.0 memoise_2.0.1
[64] shiny_1.8.0 testthat_3.2.1 miniUI_0.1.1.1
[67] profvis_0.3.8 rlang_1.1.1 Rcpp_1.0.11
[70] xtable_1.8-4 glue_1.6.2 reactable_0.4.4
[73] renv_1.0.3 pkgload_1.3.3 attempt_0.3.1
[76] rstudioapi_0.15.0 jsonlite_1.8.8 R6_2.5.1
[79] plyr_1.8.8 fs_1.6.3
# Project ---------------------------------------------------------------
Project path: "~/Documents/R/Contributor_Repos/VirgaLabs/RiverViz"
# Status ----------------------------------------------------------------
The following package(s) are out of sync [lockfile -> library]:
# CRAN ------------------------------------------------------------------
- lifecycle [1.0.3 -> 1.0.4]
- stringi [1.7.12 -> 1.8.3]
- utf8 [1.2.3 -> 1.2.4]
# GitHub ----------------------------------------------------------------
- echarts4r [0.4.5 -> JohnCoene/echarts4r@HEAD]
See ?renv::status() for advice on resolving these issues.
# Packages --------------------------------------------------------------
Library Source Lockfile Source Path Dependency
BH 1.81.0-1 CRAN 1.81.0-1 CRAN [1] indirect
BOR 0.4.0 GitHub 0.4.0 GitHub [1] direct
DBI 1.1.3 CRAN 1.1.3 CRAN [1] indirect
KernSmooth 2.23-20 CRAN <NA> <NA> [2] <NA>
MASS 7.3-60 CRAN <NA> <NA> [2] <NA>
Matrix 1.5-4 CRAN <NA> <NA> [2] <NA>
R6 2.5.1 CRAN 2.5.1 CRAN [1] indirect
RColorBrewer 1.1-3 CRAN 1.1-3 CRAN [1] indirect
RMySQL 0.10.27 CRAN 0.10.27 CRAN [1] indirect
Rcpp 1.0.11 CRAN 1.0.11 CRAN [1] indirect
RiverViz <NA> <NA> <NA> <NA> <NA> direct
UU 1.43.0 GitHub 1.43.0 GitHub [1] direct
anytime 0.3.9 CRAN 0.3.9 CRAN [1] indirect
askpass 1.2.0 CRAN 1.2.0 CRAN [1] indirect
assertthat 0.2.1 CRAN 0.2.1 CRAN [1] indirect
attempt 0.3.1 CRAN 0.3.1 CRAN [1] indirect
backports 1.4.1 CRAN 1.4.1 CRAN [1] indirect
base64enc 0.1-3 CRAN 0.1-3 CRAN [1] indirect
blob 1.2.4 CRAN 1.2.4 CRAN [1] indirect
boot 1.3-28.1 CRAN <NA> <NA> [2] <NA>
brew 1.0-10 CRAN 1.0-10 CRAN [1] indirect
brio 1.1.4 CRAN 1.1.4 CRAN [1] indirect
broom 1.0.5 CRAN 1.0.5 CRAN [1] indirect
bs4Dash 2.2.1 GitHub 2.2.1 GitHub [1] direct
bslib 0.6.1 CRAN 0.6.1 CRAN [1] indirect
cachem 1.0.8 CRAN 1.0.8 CRAN [1] indirect
callr 3.7.3 RSPM 3.7.3 RSPM [1] indirect
cellranger 1.1.0 CRAN 1.1.0 CRAN [1] indirect
checkmate 2.3.1 CRAN 2.3.1 CRAN [1] indirect
cicerone 1.0.5.9000 GitHub 1.0.5.9000 GitHub [1] direct
class 7.3-21 CRAN <NA> <NA> [2] <NA>
cli 3.6.2 CRAN 3.6.2 CRAN [1] direct
clipr <NA> <NA> <NA> <NA> [1] indirect
cluster 2.1.4 CRAN <NA> <NA> [2] <NA>
codetools 0.2-19 CRAN <NA> <NA> [2] <NA>
colorspace 2.1-0 CRAN 2.1-0 CRAN [1] indirect
commonmark 1.9.0 CRAN 1.9.0 CRAN [1] indirect
config 0.3.2 CRAN 0.3.2 CRAN [1] direct
corrplot 0.92 CRAN 0.92 CRAN [1] indirect
countrycode 1.5.0 CRAN 1.5.0 CRAN [1] indirect
covrpage <NA> <NA> <NA> <NA> <NA> direct
cpp11 0.4.7 CRAN 0.4.7 CRAN [1] indirect
crayon 1.5.2 CRAN 1.5.2 CRAN [1] indirect
credentials 2.0.1 CRAN 2.0.1 CRAN [1] indirect
crssDB 1.0.0 GitHub 1.0.0 GitHub [1] direct
curl 5.2.0 CRAN 5.2.0 CRAN [1] direct
dbplyr 2.4.0 CRAN 2.4.0 CRAN [1] indirect
desc 1.4.3 CRAN 1.4.3 CRAN [1] indirect
devtools 2.4.5 CRAN 2.4.5 CRAN [1] direct
diffobj 0.3.5 CRAN 0.3.5 CRAN [1] indirect
digest 0.6.33 CRAN 0.6.33 CRAN [1] indirect
downlit 0.4.3 CRAN 0.4.3 CRAN [1] indirect
dplyr 1.1.4 CRAN 1.1.4 CRAN [1] direct
echarts4r 0.4.5 GitHub 0.4.5 CRAN [1] direct
echartsUtils 0.7.1 GitHub 0.7.1 GitHub [1] direct
ellipsis 0.3.2 CRAN 0.3.2 CRAN [1] indirect
evaluate 0.23 CRAN 0.23 CRAN [1] indirect
fansi <NA> <NA> <NA> <NA> [1] indirect
farver 2.1.1 CRAN 2.1.1 CRAN [1] indirect
fastmap 1.1.1 CRAN 1.1.1 CRAN [1] indirect
fontawesome 0.5.2 CRAN 0.5.2 CRAN [1] indirect
foreign 0.8-84 CRAN <NA> <NA> [2] <NA>
fresh 0.2.0 CRAN 0.2.0 CRAN [1] indirect
fs 1.6.3 CRAN 1.6.3 CRAN [1] direct
gargle 1.5.2 CRAN 1.5.2 CRAN [1] indirect
generics 0.1.3 CRAN 0.1.3 CRAN [1] indirect
gert 2.0.1 CRAN 2.0.1 CRAN [1] indirect
gh 1.4.0 CRAN 1.4.0 CRAN [1] indirect
gitcreds 0.1.2 CRAN 0.1.2 CRAN [1] indirect
glue 1.6.2 CRAN 1.6.2 CRAN [1] direct
golem 0.4.1 CRAN 0.4.1 CRAN [1] direct
googledrive 2.1.1 CRAN 2.1.1 CRAN [1] indirect
googlesheets4 1.1.1 CRAN 1.1.1 CRAN [1] direct
grDevices <NA> <NA> <NA> <NA> [2] indirect
graphics <NA> <NA> <NA> <NA> [2] indirect
here 1.0.1 CRAN 1.0.1 CRAN [1] indirect
highr 0.10 CRAN 0.10 CRAN [1] indirect
htmltools 0.5.7 CRAN 0.5.7 CRAN [1] direct
htmlwidgets 1.6.4 CRAN 1.6.4 CRAN [1] direct
httpuv 1.6.13 CRAN 1.6.13 CRAN [1] indirect
httr 1.4.7 CRAN 1.4.7 CRAN [1] indirect
httr2 1.0.0 CRAN 1.0.0 CRAN [1] indirect
ids 1.0.1 CRAN 1.0.1 CRAN [1] indirect
ini 0.3.1 CRAN 0.3.1 CRAN [1] indirect
jquerylib 0.1.4 CRAN 0.1.4 CRAN [1] indirect
jsonlite 1.8.8 CRAN 1.8.8 CRAN [1] direct
knitr 1.45 RSPM 1.45 RSPM [1] direct
labeling 0.4.3 CRAN 0.4.3 CRAN [1] direct
later 1.3.2 CRAN 1.3.2 CRAN [1] indirect
lattice 0.21-8 CRAN <NA> <NA> [2] <NA>
leaflet <NA> <NA> <NA> <NA> <NA> direct
lifecycle 1.0.4 CRAN 1.0.3 CRAN [1] indirect
lubridate 1.9.3 CRAN 1.9.3 CRAN [1] direct
magrittr 2.0.3 CRAN 2.0.3 CRAN [1] indirect
memoise 2.0.1 CRAN 2.0.1 CRAN [1] indirect
methods <NA> <NA> <NA> <NA> [2] indirect
mgcv 1.8-42 CRAN <NA> <NA> [2] <NA>
mime 0.12 CRAN 0.12 CRAN [1] indirect
miniUI 0.1.1.1 CRAN 0.1.1.1 CRAN [1] indirect
munsell 0.5.0 CRAN 0.5.0 CRAN [1] indirect
nlme 3.1-162 CRAN <NA> <NA> [2] <NA>
nnet 7.3-18 CRAN <NA> <NA> [2] <NA>
openssl 2.1.1 CRAN 2.1.1 CRAN [1] indirect
packer 0.1.3 CRAN 0.1.3 CRAN [1] indirect
pillar 1.9.0 CRAN 1.9.0 CRAN [1] indirect
pkgbuild 1.4.3 CRAN 1.4.3 CRAN [1] indirect
pkgconfig <NA> <NA> <NA> <NA> [1] indirect
pkgdown 2.0.7 CRAN 2.0.7 CRAN [1] indirect
pkgload 1.3.3 CRAN 1.3.3 CRAN [1] direct
plyr 1.8.9 CRAN 1.8.9 CRAN [1] direct
pool 1.0.1 CRAN 1.0.1 CRAN [1] indirect
praise 1.0.0 CRAN 1.0.0 CRAN [1] indirect
prettyunits <NA> <NA> <NA> <NA> [1] indirect
processx 3.8.3 CRAN 3.8.3 CRAN [1] indirect
profvis 0.3.8 CRAN 0.3.8 CRAN [1] indirect
promises 1.2.1 CRAN 1.2.1 CRAN [1] indirect
ps 1.7.5 CRAN 1.7.5 CRAN [1] indirect
purrr 1.0.2 CRAN 1.0.2 CRAN [1] direct
ragg 1.2.7 CRAN 1.2.7 CRAN [1] indirect
rappdirs 0.3.3 CRAN 0.3.3 CRAN [1] indirect
rcmdcheck 1.4.0 CRAN 1.4.0 CRAN [1] indirect
reactR 0.5.0 CRAN 0.5.0 CRAN [1] indirect
reactable 0.4.4 CRAN 0.4.4 CRAN [1] direct
rematch 2.0.0 CRAN 2.0.0 CRAN [1] indirect
rematch2 2.1.2 CRAN 2.1.2 CRAN [1] indirect
remotes 2.4.2.1 CRAN 2.4.2.1 CRAN [1] indirect
renv 1.0.3 CRAN 1.0.3 CRAN [1] direct
rhub <NA> <NA> <NA> <NA> <NA> direct
rlang 1.1.2 CRAN 1.1.2 CRAN [1] direct
rmarkdown 2.25 CRAN 2.25 CRAN [1] direct
roxygen2 7.2.3 RSPM 7.2.3 RSPM [1] direct
rpart 4.1.19 CRAN <NA> <NA> [2] <NA>
rprojroot 2.0.4 CRAN 2.0.4 CRAN [1] indirect
rsconnect <NA> <NA> <NA> <NA> <NA> direct
rstudioapi 0.15.0 CRAN 0.15.0 CRAN [1] direct
rversions 2.1.2 CRAN 2.1.2 CRAN [1] indirect
sass 0.4.8 CRAN 0.4.8 CRAN [1] direct
scales 1.3.0 CRAN 1.3.0 CRAN [1] direct
sessioninfo 1.2.2 CRAN 1.2.2 CRAN [1] indirect
shiny 1.8.0 CRAN 1.8.0 CRAN [1] direct
shinyVirga 0.37.0 GitHub 0.37.0 GitHub [1] direct
shinyWidgets 0.8.0 CRAN 0.8.0 CRAN [1] indirect
shinyjs 2.1.0 CRAN 2.1.0 CRAN [1] direct
snakecase 0.11.1 CRAN 0.11.1 CRAN [1] direct
sourcetools 0.1.7-1 CRAN 0.1.7-1 CRAN [1] indirect
spatial 7.3-16 CRAN <NA> <NA> [2] <NA>
spelling <NA> <NA> <NA> <NA> <NA> direct
stats <NA> <NA> <NA> <NA> [2] direct
stringi 1.8.3 CRAN 1.7.12 CRAN [1] indirect
stringr 1.5.1 CRAN 1.5.1 CRAN [1] direct
survival 3.5-5 CRAN <NA> <NA> [2] <NA>
sys 3.4.2 CRAN 3.4.2 CRAN [1] indirect
systemfonts 1.0.5 CRAN 1.0.5 CRAN [1] indirect
testthat 3.2.1 CRAN 3.2.1 CRAN [1] direct
textshaping 0.3.7 CRAN 0.3.7 CRAN [1] indirect
tibble 3.2.1 CRAN 3.2.1 CRAN [1] direct
tidyr 1.3.0 CRAN 1.3.0 CRAN [1] direct
tidyselect 1.2.0 CRAN 1.2.0 CRAN [1] indirect
timechange 0.2.0 CRAN 0.2.0 CRAN [1] indirect
tinytex 0.49 CRAN 0.49 CRAN [1] indirect
tippy 1.0.0 GitHub 1.0.0 GitHub [1] direct
tools <NA> <NA> <NA> <NA> [2] indirect
urlchecker 1.0.1 CRAN 1.0.1 CRAN [1] indirect
usethis 2.2.2 RSPM 2.2.2 RSPM [1] direct
utf8 1.2.4 CRAN 1.2.3 CRAN [1] indirect
utils <NA> <NA> <NA> <NA> [2] direct
uuid 1.1-1 CRAN 1.1-1 CRAN [1] indirect
vctrs 0.6.5 CRAN 0.6.5 CRAN [1] indirect
virgaUtils 0.5.0 GitHub 0.5.0 GitHub [1] direct
viridisLite 0.4.2 CRAN 0.4.2 CRAN [1] indirect
waiter 0.2.5 CRAN 0.2.5 CRAN [1] indirect
waldo 0.5.2 CRAN 0.5.2 CRAN [1] indirect
whisker 0.4.1 CRAN 0.4.1 CRAN [1] indirect
withr 2.5.2 CRAN 2.5.2 CRAN [1] indirect
xfun 0.41 CRAN 0.41 CRAN [1] indirect
xml2 1.3.6 CRAN 1.3.6 CRAN [1] indirect
xopen 1.0.0 CRAN 1.0.0 CRAN [1] indirect
xtable 1.8-4 CRAN 1.8-4 CRAN [1] indirect
yaml 2.3.8 CRAN 2.3.8 CRAN [1] indirect
zip 2.3.0 CRAN 2.3.0 CRAN [1] indirect
[1]: /Users/stephenholsenbeck/Library/Caches/org.R-project.R/R/renv/library/RiverViz-78070a1e/R-4.3/aarch64-apple-darwin20
[2]: /Users/stephenholsenbeck/Library/Caches/org.R-project.R/R/renv/sandbox/R-4.3/aarch64-apple-darwin20/ac5c2659
# ABI -------------------------------------------------------------------
- No ABI conflicts were detected in the set of installed packages.
# User Profile ----------------------------------------------------------
Source Package Require Version Dev
1 /Users/stephenholsenbeck/.Rprofile utils FALSE
# Settings --------------------------------------------------------------
List of 13
$ bioconductor.version : NULL
$ external.libraries : chr(0)
$ ignored.packages : chr [1:10] "jobs" "sinew" "clipr" "pkgconfig" ...
$ package.dependency.fields: chr [1:3] "Imports" "Depends" "LinkingTo"
$ ppm.enabled : NULL
$ ppm.ignored.urls : chr(0)
$ r.version : chr(0)
$ snapshot.type : chr "explicit"
$ use.cache : logi TRUE
$ vcs.ignore.cellar : logi TRUE
$ vcs.ignore.library : logi TRUE
$ vcs.ignore.local : logi TRUE
$ vcs.manage.ignores : logi TRUE
# Options ---------------------------------------------------------------
List of 9
$ defaultPackages : chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
$ download.file.method : chr "libcurl"
$ download.file.extra : NULL
$ install.packages.compile.from.source: chr "interactive"
$ pkgType : chr "both"
$ repos : Named chr "https://cran.rstudio.com"
..- attr(*, "names")= chr "CRAN"
$ renv.consent : logi TRUE
$ renv.config.auto.snapshot : logi TRUE
$ renv.verbose : logi TRUE
# Environment Variables -------------------------------------------------
HOME = /Users/stephenholsenbeck
LANG = en_US.UTF-8
MAKE = make
R_LIBS = <NA>
R_LIBS_SITE = /Library/Frameworks/R.framework/Resources/site-library
R_LIBS_USER = /Users/stephenholsenbeck/Library/Caches/org.R-project.R/R/renv/library/RiverViz-78070a1e/R-4.3/aarch64-apple-darwin20
RENV_DEFAULT_R_ENVIRON = <NA>
RENV_DEFAULT_R_ENVIRON_USER = ~/Documents/R/.Renviron
RENV_DEFAULT_R_LIBS = <NA>
RENV_DEFAULT_R_LIBS_SITE = /Library/Frameworks/R.framework/Resources/site-library
RENV_DEFAULT_R_LIBS_USER = /Users/stephenholsenbeck/Library/R/arm64/4.3/library
RENV_DEFAULT_R_PROFILE = <NA>
RENV_DEFAULT_R_PROFILE_USER = ~/Documents/R/.Rprofile
RENV_DOWNLOAD_FILE_METHOD = libcurl
RENV_PATHS_CACHE = ~/Documents/R/renv_cache/cache
RENV_PATHS_ROOT = ~/Documents/R/renv_cache
RENV_PROJECT = /Users/stephenholsenbeck/Documents/R/Contributor_Repos/VirgaLabs/RiverViz
# PATH ------------------------------------------------------------------
- /Users/stephenholsenbeck/opt/anaconda3/bin
- /usr/local/bin
- /System/Cryptexes/App/usr/bin
- /usr/bin
- /bin
- /usr/sbin
- /sbin
- /var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/local/bin
- /var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/bin
- /var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/appleinternal/bin
- /opt/X11/bin
- /Users/stephenholsenbeck/Applications/quarto/bin
- /Library/TeX/texbin
- /usr/texbin
- /Applications/RStudio.app/Contents/Resources/app/bin/postback
# Cache -----------------------------------------------------------------
There are a total of 622 packages installed in the renv cache.
Cache path: "~/Documents/R/renv_cache/cache/v5/R-4.3/aarch64-apple-darwin20"
Any ideas on how to resolve the infinite loop here?