Working on Pop! OS. Updated to the newest version of RStudio, and ran into a problem reinstalling all the packages, specifically with the "dcurver" package. The compiler doesn't seem to like it anymore, even though it installed fine on the older version. I get the following when I try to install
* installing *source* package ‘dcurver’ ...
** this is package ‘dcurver’ version ‘0.9.2’
** package ‘dcurver’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
using C++11
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppArmadillo/include' -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/r-base-rgGXCp/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c RcppExports.cpp -o RcppExports.o
In file included from /usr/lib/R/site-library/Rcpp/include/Rcpp/routines.h:26,
from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:127,
from /usr/lib/R/site-library/RcppArmadillo/include/RcppArmadilloForward.h:25,
from /usr/lib/R/site-library/RcppArmadillo/include/RcppArmadillo.h:29,
from RcppExports.cpp:4:
/usr/lib/R/site-library/Rcpp/include/Rcpp/iostream/Rstreambuf.h: In member function ‘std::streamsize Rcpp::Rstreambuf<OUTPUT>::xsputn(const char*, std::streamsize) [with bool OUTPUT = true; std::streamsize = long int]’:
/usr/lib/R/site-library/Rcpp/include/Rcpp/iostream/Rstreambuf.h:53:20: warning: field precision specifier ‘.*’ expects argument of type ‘int’, but argument 2 has type ‘std::streamsize’ {aka ‘long int’} [-Wformat=]
53 | Rprintf("%.*s", num, s);
| ~~^~ ~~~
| | |
| int std::streamsize {aka long int}
/usr/lib/R/site-library/Rcpp/include/Rcpp/iostream/Rstreambuf.h: In member function ‘std::streamsize Rcpp::Rstreambuf<OUTPUT>::xsputn(const char*, std::streamsize) [with bool OUTPUT = false; std::streamsize = long int]’:
/usr/lib/R/site-library/Rcpp/include/Rcpp/iostream/Rstreambuf.h:57:21: warning: field precision specifier ‘.*’ expects argument of type ‘int’, but argument 2 has type ‘std::streamsize’ {aka ‘long int’} [-Wformat=]
57 | REprintf("%.*s", num, s);
| ~~^~ ~~~
| | |
| int std::streamsize {aka long int}
In file included from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:180,
from /usr/lib/R/site-library/RcppArmadillo/include/RcppArmadilloForward.h:25,
from /usr/lib/R/site-library/RcppArmadillo/include/RcppArmadillo.h:29,
from RcppExports.cpp:4:
/usr/lib/R/site-library/Rcpp/include/Rcpp/print.h: In function ‘void Rcpp::warningcall(SEXP, const string&)’:
/usr/lib/R/site-library/Rcpp/include/Rcpp/print.h:30:19: error: format not a string literal and no format arguments [-Werror=format-security]
30 | Rf_warningcall(call, s.c_str());
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
cc1plus: some warnings being treated as errors
make: *** [/usr/lib/R/etc/Makeconf:211: RcppExports.o] Error 1
ERROR: compilation failed for package ‘dcurver’
* removing ‘/home/user/R/x86_64-pc-linux-gnu-library/4.5/dcurver’
Warning in install.packages :
installation of package ‘dcurver’ had non-zero exit status