tidyverse and GDAL based packages doen't work in Shiny with Docker

[keithn]

Those look like the logs from once the R application has started to run where it's discovering that some packages aren't available. What we really need to see are the logs from when the docker container attempted to install those R packages, i.e. logs from the stage where it ran

@Leprechault1

RUN R -e "install.packages(pkgs=c('shiny','leaflet','leaflet.providers','ggplot2','dplyr','shinythemes','ggspatial','googleCloudStorageR','sf','lubridate','googleAuthR','blastula','shinymanager','tiff','raster','scales','sp','RColorBrewer','anytime','rmarkdown','knitr','zip','evaluate','highr','methods','markdown','stringr','yaml','xfun','formatR','testit','digest','rgl','codetools','htmlwidgets','webshot','tikzDevice','tinytex','reticulate','JuliaCall','magick','png','jpeg','gifski','xml2','showtext','tibble','sass','bslib','tidyverse','bigrquery','DBI','glue','geojsonR','fst'), repos='https://cran.rstudio.com/',force=TRUE,dependencies=TRUE)" 

and work backwards from there in diagnosing this issue.