Help with an error message in R

[pieterjanvc]

@jod14139

Problem with OTU/taxa indices among those you provided.
Check using intersect() and taxa_names()

Hi,

Did you use the suggested checks? What's their output?

Also, when you have an issue like this, you should not just share the error, as we are not able to recreate the issue and figure out the problem. Try and create a reprex next time. A reprex consists of the minimal code and data needed to recreate the issue/question you're having. You can find instructions how to build and share one here:

FAQ: How to do a minimal reproducible example ( reprex ) for beginners

A minimal reproducible example consists of the following items: A minimal dataset, necessary to reproduce the issue The minimal runnable code necessary to reproduce the issue, which can be run on the given dataset, and including the necessary information on the used packages. Let's quickly go over each one of these with examples: Minimal Dataset (Sample Data) You need to provide a data frame that is small enough to be (reasonably) pasted on a post, but big enough to reproduce your issue. Let's say, as an example, that you are working with the iris data frame head(iris) #> Sepal.Length Sepal.Width Petal.Length Petal.Width Species #> 1 5.1 3.5 1.4 0.…

PJ