Different Rmarkdown to PDF compiler behavior with RMarkown and Bookdown

Hi @dkStevensNZed

Is this the same issues as in this other one ?

This seems to be related to some content in your Rmd file. Can you share the Rmd content related the tex output ? probably some missing escaping somehow :thinking: maybe the & ?

I believe this could be related to cropping. By default, fig_crop = TRUE in tufte::tufte_book() and it seems it does not play well with some of your images. Can you try setting fig_crop = FALSE ?
Cropping only happens in PDF output not HTML. The default behavior may have changed some time ago on Windows, but it has been a while. Hopefully deactivating cropping will solve this issue.